|本期目录/Table of Contents|

[1]彭佳佳,刘克林,刘丽娅,等.红掌佛焰苞数字基因表达谱及关键基因表达水平分析[J].江苏农业科学,2016,44(03):48-52.
 Peng Jiajia,et al.Digital gene expression profiling and key genes expression analysis of Anthurium andraeanum spathe[J].Jiangsu Agricultural Sciences,2016,44(03):48-52.
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红掌佛焰苞数字基因表达谱及关键基因表达水平分析(PDF)
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《江苏农业科学》[ISSN:1002-1302/CN:32-1214/S]

卷:
第44卷
期数:
2016年03期
页码:
48-52
栏目:
生物技术
出版日期:
2016-03-25

文章信息/Info

Title:
Digital gene expression profiling and key genes expression analysis of Anthurium andraeanum spathe
作者:
彭佳佳12 刘克林3 刘丽娅4 吕学华4 杨哲2 李佩愉2 刘春2 明军2 袁素霞2 平吉成1 张黎1
1.宁夏大学农学院,宁夏银川750001;2.中国农业科学院蔬菜花卉研究所,北京 100081;
3.北京市大东流苗圃,北京 102211;4.河北省平泉县林木种苗管理站,河北平泉 067000
Author(s):
Peng Jiajiaet al
关键词:
数字基因表达谱红掌佛焰苞花青素基因表达水平基因序列关键基因花色变化关键酶
Keywords:
-
分类号:
S682.03
DOI:
-
文献标志码:
A
摘要:
以红掌佛焰苞S5(盛花期:红色)、S8(衰老期:绿色)时期为试验材料进行数字基因表达谱(digital gene expression profiling,DGE)测序,分别得到12 766 374条(1.28 G)、18 583 390条(1.86 G)可分析序列(clean reads),被成功注释有差异表达的基因序列2 316条。为探究红掌佛焰苞颜色变化过程中关键基因的表达水平,将差异基因定位在花青素生物合成途径11条表达量变化的序列上,并通过实时荧光定量PCR对其中的4条序列进行检验,验证了DGE
Abstract:
-

参考文献/References:

[1]Gantait S,Mandal N,Bhattacharyya S,et al. In vitro mass multiplication with pure genetic identity in Anthurium andreanum Lind[J]. Plant Tissue Cult Biotech,2008,18(2):113-122.
[2]戴思兰. 园林植物遗传学[M]. 北京:中国林业出版社,2005:179-186.
[3]Iwata R Y,Tang C S,Kamemoto H. Concentration of anthocyanins affecting spathe colour in Anthuriums[J]. J Am Soc Hort Sci,1985,110(3):383-385.
[4]Martin C,Gerats T. Control of pigment biosynthesis genes during petal development[J]. The Plant Cell,1993,5(10):1253-1264.
[5]Martin C,Jin H,Schwinn K. Regulation of phytochemicals by molecular techniques[M]//Romeo J T,Saunders J A,Matthews B F. Beltsville,Maryland,USA:Pergamon,2001:155-169.
[6]Holton T A,Cornish E C. Genetics and biochemistry of anthocyanin biosynthesis[J]. The Plant Cell,1995,7(7):1071-1083.
[7]Liang P,Pardee A B. Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction[J]. Science,1992,257(572):967-971.
[8]Li B,Dewey C N. RSEM:accurate transcript quantification from RNA-Seq data with or without a reference genome[J]. BMC Bioinformatics,2011,12:323.
[9]Audic S,Claverie J M. The significance of digital gene expression profiles[J]. Genome Research,1997,7(10):986-995.
[10]Young M D,Wakefield M J,Smyth G K. Gene ontology analysis for RNA-seq:accounting for selection bias[J]. Genome Biology,2010,11(2):r14.
[11]Kanehisa M,Araki M,Goto S,et al. KEGG for linking genomes to life and the environment[J]. Nucleic Acids Research,2008,36(Database issue):D480-D484.
[12]Gopaulchan D,Lennon A M,Umaharan P. Identification of reference genes for expression studies using quantitative RT-PCR in spathe tissue of Anthurium andraeanum (Hort.)[J]. Scientia Horticulturae,2013,153:1-7.
[13]Mol J,Grotewold E,Koes R. How genes paint flowers and seeds[J]. Trends Plant Sci,1998,3:212-217.
[14]Winkel-Shirley B. Biosynthesis of favonoids and effects of stress[J]. Current Opinion in Plant Biology,2002,5(3):218-223.
[15]To K Y,Wang C K. Floriculture,ornamental and plant biotechnology advances and tropical issues[M]. Isleworth,UK:Global Science Books,2006:300-310.
[16]韩科厅,胡可,戴思兰. 观赏植物花色的分子设计[J]. 分子植物育种,2008,6(1):16-24.
[17]Barber M S,Mitchell H J. Regulation of phenylpropanoid metabolism in relation to lignin biosynthesis in plants[J]. Int Rev Cytol,1997,172:243-293.
[18]李波,梁颖,柴友荣. 植物肉桂酰辅酶A还原酶(CCR)基因的研究进展[J]. 分子植物育种,2006,4(增刊1):55-65.
[19]Millar D J,Long M,Donovan G,et al. Introduction of sense constructs of cinnamate 4-hydroxylase (CYP73A24) in transgenic tomato plants shows opposite effects on flux into stem lignin and fruit flavonoids[J]. Phytochemistry,2007,68(11):1497-1509.
[20]Li F,Jin Z,Qu W,et al. Cloning of a cDNA encoding the Saussurea medusa chalone isomerase and its expression in transgenic tobacco[J]. Plant Physiology and Biochemistry,2006,44(7/8/9):455-461.
[21]Owens D K,Mclntosh C A. Biosynthesis and function of Citrus glycosylated flavonoids[M]. New York:Springer,2011:67-95.
[22]Martens S,Teeri T,Forkmann G. Heterologous expression of dihydronavonol 4-reductases from various plant[J]. Febs Letters,2002,531(3):453-458.
[23]Collette V E,Jameson P E,Schwinn K E,et al. Temporal and spatial expression of flavonoid biosynthetic genes in flowers of Anthurium andraeanum[J]. Physiologia Plantarum,2004,122(3):297-304.

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备注/Memo

备注/Memo:
收稿日期:2015-01-19
基金项目:农业部园艺作物生物学与种质创制重点实验室资助项目;中国农业科学院与北京市大兴区科技合作项目(编号:20130109);北京市科技计划研发攻关项目(编号:YLHH201400111)。
作者简介:彭佳佳(1990—),女,宁夏银川人,硕士研究生,主要从事红掌花卉育种栽培研究。E-mail:pengjiajia1990@163.com。
通信作者:张黎,教授,主要从事花卉育种栽培研究,E-mail:zhang_li9988@163.com;刘春,研究员,主要从事红掌花卉育种栽培研究,E-mail:liuchun@caas.cn。
更新日期/Last Update: 2016-03-25