|本期目录/Table of Contents|

[1]曹辉庆,黄诚梅,蒋胜理,等.甘蔗SPSB基因5′侧翼序列的克隆及生物信息学分析[J].江苏农业科学,2019,47(15):94-98.
 Cao Huiqing,et al.Cloning and bioinformatics analysis of 5′-flanking sequence of SPSB gene in sugarcane[J].Jiangsu Agricultural Sciences,2019,47(15):94-98.
点击复制

甘蔗SPSB基因5′侧翼序列的克隆及生物信息学分析(PDF)
分享到:

《江苏农业科学》[ISSN:1002-1302/CN:32-1214/S]

卷:
第47卷
期数:
2019年第15期
页码:
94-98
栏目:
生物技术
出版日期:
2019-09-03

文章信息/Info

Title:
Cloning and bioinformatics analysis of 5′-flanking sequence of SPSB gene in sugarcane
作者:
曹辉庆1 黄诚梅1 蒋胜理1 罗海斌1 邓智年2 吴凯朝2 徐林2 魏源文1
1.广西作物遗传改良生物技术重点开放实验室,广西南宁 530007;2.广西农业科学院甘蔗研究所,广西南宁 530007
Author(s):
Cao Huiqinget al
关键词:
甘蔗 ScSPSB基因侧翼序列生物信息学分析
Keywords:
-
分类号:
S566.101
DOI:
-
文献标志码:
A
摘要:
蔗糖磷酸合成酶(SPS)是蔗糖合成途径的关键限速酶,对蔗糖的合成和碳水化合物的分配具有重要的调控作用。采用染色体步移法技术克隆获得了甘蔗SPSB基因5′端侧翼序列,并对其序列进行生物信息学分析。分离获得了4 399 bp的5′侧翼序列,该序列除具有启动子核心序列 TATA-box 和增强子元件 CAAT-box等典型的真核生物启动子基本元件外,还含有多种光应答元件、激素响应元件,以及与缺氧、干旱、低温诱导有关的顺式作用元件和一些组织调控表达有关的顺式调控元件,表明ScSPSB启动子可能具有逆境应答、激素应答及组织特异表达特性,值得开展进一步的功能研究。
Abstract:
-

参考文献/References:

[1]Hashida Y,Hirose T,Okamura M,et al. A reduction of sucrose phosphate synthase (SPS) activity affects sucrose/starch ratio in leaves but does not inhibit normal plant growth in rice[J]. Plant science,2016,253:40-49.
[2]Winter H,Huber S C. Regulation of sucrose metabolism in higher plants:localization and regulation of activity of key enzymes[J]. Plant Sciences,2000,19(1):31-67.
[3]Seger M,Gebril S,Tabilona J,et al. Impact of concurrent overexpression of cytosolic glutamine synthetase (GS1) and sucrose phosphate synthase (SPS) on growth and development in transgenic tobacco[J]. Planta,2015,241(1):69-81.
[4]Batta S K,Thind D K,Singh P,et al. Variability in activities of sucrose metabolizing enzymes in relation to sucrose accumulation among parents and their progenies of sugarcane[J]. Sugar Tech,2011,13(2):114-122.
[5]Sachdeva M,Bhatia S,Batta S K. Sucrose accumulation in sugarcane:a potential target for crop improvement[J]. Acta Physiologiae Plantarum,2011,33(5):1571-1583.
[6]潘有强,罗海玲,李杨瑞. 甘蔗节间蔗糖含量与和蔗糖代谢相关的4种酶活性之间的关系剖析[J]. 植物生理学通讯,2007,43(5):861-864.
[7]Volkert K,Debast S,Voll L M,et al. Loss of the two major leaf isoforms of sucrose-phosphate synthase in Arabidopsis thaliana limits sucrose synthesis and nocturnal starch degradation but does not alter carbon partitioning during photosynthesis[J]. Journal of experimental botany,2014,65(18):5217-5229.
[8]Wang D,Zhao J T,Hu B,et al. Identification and expression profile analysis of the sucrose phosphate synthase gene family in Litchi chinensis Sonn[J]. PeerJ,2018,6:1-16.
[9]Valdez-Alarcon J J,Ferrando M,Salerno G,et al. Characterization of a rice sucrose-phosphate synthase-encoding gene[J]. Gene,1996,170(2):217-222.
[10]李莹,刘宝辉,张中男,等. 玉米蔗糖磷酸合成酶(SPS)基因的克隆及表达载体的构建[J]. 生物信息学,2005(2):66-68,72.
[11]Sugiharto B,Sakakibara H,Sumadi,et al. Differential expression of two genes for sucrose-phosphate synthase in sugarcane:Molecular cloning of the cDNAs and comparative analysis of gene expression[J]. Plant and Cell Physiology,1997,38(8):961-965.
[12]Li H C,Lu H B,Yang F Y,et al. Cloning and sequence analysis of sucrose phosphate synthase gene from varieties of Pennisetum species[J]. Genetics and Molecular Research,2015,14(1):2799-2808.
[13]Castleden C K,Aoki N,Gillespie V J,et al. Evolution and function of the sucrose-phosphate synthase gene families in wheat and other grasses[J]. Plant Physiology,2004,135(3):1753-1764.
[14]Langenkamper G,Fung R W,Newcomb R D,et al. Sucrose phosphate synthase genes in plants belong to three different families[J]. Journal of Molecular Evolution,2002,54(3):322-332.
[15]黄东亮,李双喜,廖青,等. 植物蔗糖磷酸合成酶研究进展[J]. 中国生物工程杂志,2012,32(6):109-119.
[16]Solis-Guzman M G,Arguello-Astorg G,Lopez-Bucio J,et al. Arabidopsis thaliana sucrose phosphate synthase (SPS) genes are expressed differentially in organs and tissues,and their transcription is regulated by osmotic stress[J]. Gene Expression Patterns,2017,25-26:92-101.
[17]Reimholz R,Geiger M,Haake V,et al. Potato plants contain multiple forms of sucrose phosphate synthase,which differ in their tissue distributions,their levels during development,and their responses to low temperature[J]. Plant Cell and Environment,1997,20(3):291-305.
[18]桂意云,汪淼,秦翠鲜,等. 甘蔗各家族SPS基因表达特性分析[J]. 南方农业学报,2016,47(2):174-179.
[19]Verma A K,Upadhyay S K,Verma P C,et al. Functional analysis of sucrose phosphate synthase (SPS) and sucrose synthase (SS) in sugarcane (Saccharum) cultivars[J]. Plant Biology,2011,13(2):325-332.
[20]陈兰平,陈由强,方静平,等. 甘蔗SPS基因家族成员表达与糖分积累关系解析[J]. 热带作物学报,2014,35(7):1354-1361.
[21]ElSayed A I,Boulila M,Rafudeen M S. Investigation into the expression of sucrose transporters and sucrose phosphate synthase mRNA in different plant species[J]. Agricultural Research,2013,2(1):31-42.
[22]Sicher R C,Kremer D F. Changes of sucrose-phosphate synthase activity in barley primary leaves during light/dark transitions[J]. Plant Physiology,1984,76(4):910-912.
[23]Chen S,Hajirezaei M,Bornke F. Differential expression of sucrose-phosphate synthase isoenzymes in tobacco reflects their functional specialization during dark-governed starch mobilization in source leaves[J]. Plant Physiology,2005,139(3):1163-1174.
[24]Guy C L,Huber J L A,Huber S C. Sucrose phosphate synthase and sucrose accumulation at low temperature[J]. Plant physiology,1992,100(1):502-508.
[25]Itai A,Hatanaka R,Irie H,et al. Effects of storage temperature on fruit quality and expression of sucrose phosphate synthase and acid invertase genes in Japanese pear[J]. Horticulture Journal,2015,84(3):227-232.
[26]Doehlert D C,Huber S C. Spinach leaf sucrose phosphate synthase[J]. FEBS Letters,1983,153(2):293-297.
[27]Sakalo V D,Kurchii V M. Hormonal control of sucrose phosphate synthase and sucrose synthase in sugar beet[J]. Russian Journal of Plant Physiology,2004,51(2):183-188.
[28]Dare A P,Schaffer R J,Lin-Wang K,et al. Identification of a cis-regulatory element by transient analysis of co-ordinately regulated genes[J]. Plant Methods,2008,4(17):1-10.
[29]王旭明,赵夏夏,陈景阳,等. 盐胁迫下水稻孕穗期SSSPS活性与糖积累的响应及其相关性分析[J]. 江苏农业学报,2018,34(3):481-486.
[30]Hirose T,Hashida Y,Aoki N,et al. Analysis of gene-disruption mutants of a sucrose phosphate synthase gene in rice,OsSPS1,shows the importance of sucrose synthesis in pollen germination[J]. Plant Science,2014,225:102-106.
[31]Yonekura M,Aoki N,Hirose T,et al. The promoter activities of sucrose phosphate synthase genes in rice,OsSPS1 and OsSPS11,are controlled by light and circadian clock,but not by sucrose[J]. Frontiers in Plant Science,2013(4):31.
[32]张积森,郑月霞,方静平,等. 甘蔗SPS基因启动子5′侧翼缺失的GUS表达载体构建[J]. 福建教育学院学报,2012(3):118-121.
[33]高玉娜,林荣华,周平,等. 甘蔗蔗糖磷酸合成酶基因启动子遗传转化烟草的研究[J]. 福建师范大学学报(自然科学版),2010,26(1):100-102,119.
[34]Naqvi R Z,Mubeen,H,et al. Identification,isolation and evaluation of a constitutive sucrose phosphate synthase gene promoter from tomato[J]. Pakistan Journal of Botany,2017,49(3):1105-1112.
[35]Nadia I,Muhammad A,Amara M,et al. Isolation and characterization of sucrose phosphate synthase promoter from cotton(Gossypium hirsutum L.)[J]. Australian Journal of Crop Science,2017,11(6):668-675.
[36]Arguello-Astorga G R,Herrera-Estrella L R. Ancestral multipartite units in light-responsive plant promoters have structural features correlating with specific phototransduction pathways[J]. Plant Physiology,1996,112(3):1151-1166.
[37]张莉,荐红举,杨博,等. 甘蓝型油菜蔗糖磷酸合酶(SPS)基因家族成员鉴定及表达分析[J]. 作物学报,2018(2):1-11.

相似文献/References:

[1]李恒锐,邱文武,马文清,等.不同类型肥料对甘蔗产量及品质的影响[J].江苏农业科学,2014,42(10):83.
 Li Hengrui,et al.Effects of different types of fertilizers on yield and quality of cane[J].Jiangsu Agricultural Sciences,2014,42(15):83.
[2]林克涛,朱朝枝,陈如凯.基于灰色模型的中国甘蔗产业生态服务价值预测[J].江苏农业科学,2016,44(04):505.
 Lin Ketao,et al.Forecasting on ecological service value of Chinas sugarcane industry based on grey model[J].Jiangsu Agricultural Sciences,2016,44(15):505.
[3]罗菊川,区颖刚,刘庆庭.甘蔗断尾现状及断尾机构分析[J].江苏农业科学,2016,44(06):423.
 Luo Juchuan,et al.Analysis of status and cutting mechanism of sugarcane tail-breaking[J].Jiangsu Agricultural Sciences,2016,44(15):423.
[4]叶颉,许莉萍.基于DEA的中国甘蔗优势产区生产效率实证研究[J].江苏农业科学,2015,43(05):476.
 Ye Jie.Empirical study on production efficiency of Chinas main sugarcane-producing regions based on data envelopment analysis[J].Jiangsu Agricultural Sciences,2015,43(15):476.
[5]管欢,刘晓亮,唐文伟,等.环嗪酮对不同甘蔗品种苗期生长的影响[J].江苏农业科学,2015,43(05):98.
 Guan Huan,et al.Effect of hexazinone on growth of different sugarcane varieties at seedling stage[J].Jiangsu Agricultural Sciences,2015,43(15):98.
[6]伍苏然,杨乃博,熊国如,等.海南蔗区不同甘蔗种质对螟虫抗性差异比较[J].江苏农业科学,2015,43(03):100.
 Wu Suran,et al.Comparison of borer resistance difference of different sugarcane germplasm in Hainan Province[J].Jiangsu Agricultural Sciences,2015,43(15):100.
[7]杨平飞,李素丽,李正文,等.分根区交替灌溉对甘蔗生理生化性状的影响[J].江苏农业科学,2015,43(03):103.
 Yang Pingfei,et al.Effect of root-divided alternative irrigation on physiological and biochemical properties of sugarcane[J].Jiangsu Agricultural Sciences,2015,43(15):103.
[8]谢金兰,吴建明,黄杏,等.我国甘蔗新品种(系)的抗旱性研究[J].江苏农业科学,2015,43(03):108.
 Xie Jinlan,et al.Study on drought resistance of new sugarcane varieties(lines)[J].Jiangsu Agricultural Sciences,2015,43(15):108.
[9]李晓君,周文吉,周启武,等.ShSAP1的原核表达及多克隆抗体的制备[J].江苏农业科学,2015,43(03):43.
 Li Xiaojun,et al.Prokaryotic expression of ShSAP1 and preparation of its polyclonal antibodies[J].Jiangsu Agricultural Sciences,2015,43(15):43.
[10]檀小辉,张继,梁芳,等.基于EST序列的甘蔗SNP发掘及分析[J].江苏农业科学,2016,44(07):64.
 Tan Xiaohui,et al.Excavation and analysis of sugarcane SNP based on expressed sequence tag[J].Jiangsu Agricultural Sciences,2016,44(15):64.

备注/Memo

备注/Memo:
收稿日期:2019-05-05
基金项目:广西农业科学院基本科研业务专项(编号:桂农科2017YM35、2015YT96)。
作者简介:曹辉庆(1975—),女,广西全州人,硕士,助理研究员,主要从事作物栽培学与分子生物学研究工作。E-mail:1034403583@qq.com。
通信作者:魏源文,博士,研究员,主要从事植物分子生物学与分子病理学研究工作。E-mail:yw-wei@126.com。
更新日期/Last Update: 2019-08-05