[1]Shatters R G,Boykin L M,Lapointe S L,et al. Phylogenetic and structural relationships of the PR5 gene family reveal an ancient multigene family conserved in plants and select animal taxa[J]. Journal of Molecular Evolution,2006,63(1):12-29.
[2]刘潮,王慧,杨静,等. 水稻类甜蛋白基因家族鉴定及表达的初步分析[J]. 分子植物育种,2017,15(10):3845-3855.
[3]刘潮,韩利红,王海波,等. 谷子类甜蛋白基因家族的鉴定与密码子偏性分析[J]. 西北农业学报,2018,27(1):52-61.
[4]Liu Y F,Liu L J,Asiegbu F O,et al. Molecular identification and antifungal properties of four thaumatin-like proteins in spruce (Picea likiangensis)[J]. Forests,2021,12(9):1268.
[5]Sun W B,Zhou Y,Movahedi A,et al. Thaumatin-like protein(Pe-TLP) acts as a positive factor in transgenic poplars enhanced resistance to spots disease[J]. Physiological and Molecular Plant Pathology,2020,112:101512.
[6]Faillace G R,Turchetto-Zolet A C,Guzman F L,et al. Genome-wide analysis and evolution of plant thaumatin-like proteins:a focus on the origin and diversification of osmotins[J]. Molecular Genetics and Genomics,2019,294(5):1137-1157.
[7]Menu-Bouaouiche L,Vriet C,Peumans W J,et al. A molecular basis for the endo-β1,3-glucanase activity of the thaumatin-like proteins from edible fruits[J]. Biochimie,2003,85(1/2):123-131.
[8]刘潮,韩利红,王海波,等. 植物类甜蛋白基因家族研究进展[J]. 生物技术通报,2018,34(3):9-17.
[9]de Jesús-Pires C,Ferreira-Neto J R C,Pacifico Bezerra-Neto J,et al. Plant thaumatin-like proteins:function,evolution and biotechnological applications[J]. Current Protein and Peptide Science,2020,21(1):36-51.
[10]Guo J,Zhao X,Wang H L,et al. Expression of the LePR5 gene from cherry tomato fruit induced by Cryptococcus laurentii and the analysis of LePR5 protein antifungal activity[J]. Postharvest Biology and Technology,2016,111:337-344.
[11]Kimura M.Possibility of extensive neutral evolution under stabilizing selection with special reference to nonrandom usage of synonymous codons[J]. Proceedings of the National Academy of Sciences of the United States of America,1981,78(9):5773-5777.
[12]Arella D,Dilucca M,Giansanti A. Codon usage bias and environmental adaptation in microbial organisms[J]. Molecular Genetics and Genomics,2021,296(3):751-762.
[13]吴宪明,吴松锋,任大明,等. 密码子偏性的分析方法及相关研究进展[J]. 遗传,2007,29(4):420-426.
[14]刘潮,韩利红,王海波,等. 胡萝卜类甜蛋白家族鉴定与生物信息学分析[J]. 中国蔬菜,2017(2):38-44.
[15]Zhao J P,Su X H. Patterns of molecular evolution and predicted function in thaumatin-like proteins of Populus trichocarpa[J]. Planta,2010,232(4):949-962.
[16]Shiu S H,Karlowski W M,Pan R S,et al. Comparative analysis of the receptor-like kinase family in Arabidopsis and rice[J]. Plant Cell,2004,16(5):1220-1234.
[17]Fedorov A,Saxonov S,Gilbert W. Regularities of context-dependent codon bias in eukaryotic genes[J]. Nucleic Acids Research,2002,30(5):1192-1197.
[18]Desai M M,Fisher D S. Beneficial mutation-selection balance and the effect of linkage on positive selection[J]. Genetics,2007,176(3):1759-1798.
[19]Zelasko S,Palaria A,Das A. Optimizations to achieve high-level expression of cytochrome P450 proteins using Escherichia coli expression systems[J]. Protein Expression and Purification,2013,92(1):77-87.
[20]Wright F. The ‘effective number of codons’ used in a gene[J]. Gene,1990,87(1):23-29.
[21]Duret L,Mouchiroud D. Expression pattern and,surprisingly,gene length shape codon usage in Caenorhabditis,Drosophila,and Arabidopsis[J]. Proceedings of the National Academy of Sciences of the United States of America,1999,96(8):4482-4487.
[22]Kawabe A,Miyashita N T. Patterns of codon usage bias in three dicot and four monocot plant species[J]. Genes & Genetic Systems,2003,78(5):343-352.
[23]Zhang W J,Zhou J,Li Z F,et al. Comparative analysis of codon usage patterns among mitochondrion,chloroplast and nuclear genes in Triticum aestivum L.[J]. Journal of Integrative Plant Biology,2007,49(2):246-254.
[24]Cui Z C,Liang F,Zhang J R,et al. Transgenic expression of TaTLP1,a thaumatin-like protein gene,reduces susceptibility to common root rot and leaf rust in wheat[J]. The Crop Journal,2021,9(5):1214-1218.
[25]Nawrot R,Musidlak O,Barylski J,et al. Characterization and expression of a novel thaumatin-like protein (CcTLP1) from papaveraceous plant Corydalis cava[J]. International Journal of Biological Macromolecules,2021,189:678-689.
[26]齐莉莉,刘大钧. 小麦基因组研究进展[J]. 麦类作物学报,1999,19(1):1-5.
[27]田清震,谢传晓,李新海,等. 玉米基因组学研究进展[J]. 玉米科学,2006,14(3):1-5,9.
[28]Fuglsang A. The ‘effective number of codons’ revisited[J]. Biochemical and Biophysical Research Communications,2004,317(3):957-964.
[29]刘汉梅,赵耀,顾勇,等. 几种植物waxy基因的密码子用法特性分析[J]. 核农学报,2010,24(3):476-481.
[30]Tatarinova T V,Alexandrov N N,Bouck J B,et al. GC3 biology in corn,rice,Sorghum and other grasses[J]. BMC Genomics,2010,11:308.
[31]Guo X Y,Bao J D,Fan L J. Evidence of selectively driven codon usage in rice:implications for GC content evolution of Gramineae genes[J]. FEBS Letters,2007,581(5):1015-1021.
[32]Rao Y,Wu G,Wang Z,et al. Mutation bias is the driving force of codon usage in the Gallus gallus genome[J]. DNA Research,2011,18(6):499-512.
[33]Liu Q P,Feng Y,Zhao X A,et al. Synonymous codon usage bias in Oryza sativa[J]. Plant Science,2004,167(1):101-105.
[34]Liu H M,He R,Zhang H Y,et al. Analysis of synonymous codon usage in Zea mays[J]. Molecular Biology Reports,2010,37(2):677-684.
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Niu Baozhen,et al.Cloning and polymorphism analysis of mitochondrial DNA ND6 gene of Bagarius yarrelli[J].Jiangsu Agricultural Sciences,2016,44(10):62.
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Wang Tingting,et al.Phylogenetic analysis of HSF family of tomato heat shock transcription factor[J].Jiangsu Agricultural Sciences,2016,44(10):48.
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Fu Shengyong,et al.Analysis of genetic polymorphisms and system evolution of mtDNA D-loop area in some Chinese pigeons[J].Jiangsu Agricultural Sciences,2015,43(10):41.
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Ma Qiang,et al.Conservative and transcriptional analysis of Nbslp2 in Nosema bombycis[J].Jiangsu Agricultural Sciences,2017,45(10):150.
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