|本期目录/Table of Contents|

[1]王海静,李晓颍,殷亚蕊,等.京红桃及其晚熟芽变晚京红果实差异表达转录因子的转录组分析[J].江苏农业科学,2022,50(22):1-10.
 Wang Haijing,et al.Transcriptome analysis of transcription factors in two peach cultivars ‘Jing Hong’ and its late-ripening mutant ‘Wan Jing Hong’[J].Jiangsu Agricultural Sciences,2022,50(22):1-10.
点击复制

京红桃及其晚熟芽变晚京红果实差异表达转录因子的转录组分析(PDF)
分享到:

《江苏农业科学》[ISSN:1002-1302/CN:32-1214/S]

卷:
第50卷
期数:
2022年第22期
页码:
1-10
栏目:
“转录组学”专栏
出版日期:
2022-11-20

文章信息/Info

Title:
Transcriptome analysis of transcription factors in two peach cultivars ‘Jing Hong’ and its late-ripening mutant ‘Wan Jing Hong’
作者:
王海静李晓颍殷亚蕊宋立琴张立彬武军凯
河北科技师范学院园艺科技学院/河北省特色园艺种质挖掘与创新利用重点实验室,河北秦皇岛 066004
Author(s):
Wang Haijinget al
关键词:
晚熟芽变转录组转录因子表达分析
Keywords:
-
分类号:
S662.101
DOI:
-
文献标志码:
A
摘要:
为探究调控桃果实发育成熟的分子机制,以京红及其晚熟芽变晚京红为试验材料,基于转录组测序(RNA-seq)数据分析二者果实在转录组中差异表达的转录因子基因,并分析其在果实发育成熟过程中的表达模式。结果表明,共鉴定出302个转录因子基因,其中158个差异表达,分属于B3、MYB-related、NAC、WRKY、bHLH、MYB和HB-other等转录因子家族。对京红和晚京红相同花后时间差异表达转录因子进行分析,发现一系列转录因子以不同的表达模式参与了桃果实发育成熟调控过程,进一步筛选到17个转录因子表达模式存在较大差异,表明与晚京红成熟期延长调控密切相关。试验结果为深入研究特定转录因子在桃果实成熟过程中的功能奠定了基础。
Abstract:
-

参考文献/References:

[1]Cherian S,Figueroa C R,Nair H.‘Movers and shakers’ in the regulation of fruit ripening:a cross-dissection of climacteric versus non-climacteric fruit[J]. Journal of Experimental Botany,2014,65(17):4705-4722.
[2]Yamasaki K,Kigawa T,Seki M,et al. DNA-binding domains of plant-specific transcription factors:structure,function,and evolution[J]. Trends in Plant Science,2013,18(5):267-276.
[3]王传增,余贤美,董庆龙,等. 桃已知MADS-box转录因子的生物信息学及花发育表达分析[J]. 核农学报,2015,29(5):849-858.
[4]Lovisetto A,Guzzo F,Tadiello A,et al. Characterization of a bZIP gene highly expressed during ripening of the peach fruit[J]. Plant Physiology and Biochemistry,2013,70:462-470.
[5]Gu C,Guo Z H,Cheng H Y,et al. A HD-ZIP Ⅱ HOMEBOX transcription factor,PpHB.G7,mediates ethylene biosynthesis during fruit ripening in peach[J]. Plant Science,2019,278:12-19.
[6]Lindemose S,Jensen M K,van de Velde J,et al. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana[J]. Nucleic Acids Research,2014,42(12):7681-7693.
[7]Zhou H,Kui L W,Wang H L,et al. Molecular genetics of blood-fleshed peach reveals activation of anthocyanin biosynthesis by NAC transcription factors[J]. The Plant Journal,2015,82(1):105-121.
[8]Pirona R,Eduardo I,Pacheco I,et al. Fine mapping and identification of a candidate gene for a major locus controlling maturity date in peach[J]. BMC Plant Biology,2013,13(1):166.
[9]Liu J H,Xu B Y,Hu L F,et al. Involvement of a banana MADS-box transcription factor gene in ethylene-induced fruit ripening[J]. Plant Cell Reports,2009,28(1):103.
[10]Li J J,Li F,Qian M,et al. Characteristics and regulatory pathway of the PrupeSEP1 SEPALLATA gene during ripening and softening in peach fruits[J]. Plant Science,2017,257:63-73.
[11]Wang X B,Zeng W F,Ding Y F,et al. Peach ethylene response factor PpeERF2 represses the expression of ABA biosynthesis and cell wall degradation genes during fruit ripening[J]. Plant Science,2019,283:116-126.
[12]Zhou H,Zhao L,Yang Q R,et al. Identification of EIL and ERF genes related to fruit ripening in peach[J]. International Journal of Molecular Sciences,2020,21(8):2846.
[13]Livak K J,Schmittgen T D. Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method[J]. Methods,2001,25(4):402-408.
[14]Chen X,Chen R H,Wang Y F,et al. Genome-wide identification of WRKY transcription factors in Chinese jujube (Ziziphus jujuba Mill.) and their involvement in fruit developing,ripening,and abiotic stress[J]. Genes,2019,10(5):360.
[15]Mori K,Lemaire-Chamley M,Asamizu E,et al. Comparative analysis of common genes involved in early fruit development in tomato and grape[J]. Plant Biotechnology,2013,30(3):295-300.
[16]Lin Q,Jiang Q,Lin J Y,et al. Heat shock transcription factors expression during fruit development and under hot air stress in Ponkan (Citrus reticulata Blanco cv. Ponkan) fruit[J]. Gene,2015,559(2):129-136.
[17]Guo J,Cao K,Deng C,et al. An integrated peach genome structural variation map uncovers genes associated with fruit traits[J]. Genome Biology,2020,21(1):258.
[18]Ariel F D,Manavella P A,Dezar C A,et al. The true story of the HD-Zip family[J]. Trends in Plant Science,2007,12(9):419-426.
[19]Nakano T,Suzuki K,Fujimura T,et al. Genome-wide analysis of the ERF gene family in Arabidopsis and rice[J]. Plant Physiology,2006,140(2):411-432.
[20]李慧峰,董庆龙,赵强,等. 14个苹果AP2/ERF转录因子基因的克隆与表达分析[J]. 核农学报,2020,34(5):921-931.
[21]Xiao Y Y,Chen J Y,Kuang J F,et al. Banana ethylene response factors are involved in fruit ripening through their interactions with ethylene biosynthesis genes[J]. Journal of Experimental Botany,2013,64(8):2499-2510.
[22]Jin J P,Tian F,Yang D C,et al. PlantTFDB 4.0:toward a central hub for transcription factors and regulatory interactions in plants[J]. Nucleic Acids Research,2016,45(1):1040-1045.
[23]Gong D D,Cao S F,Sheng T,et al. Effect of blue light on ethylene biosynthesis,signalling and fruit ripening in postharvest peaches[J]. Scientia Horticulturae,2015,197:657-664.
[24]Zhang C H,Shangguan L F,Ma R J,et al. Genome-wide analysis of the AP2/ERF superfamily in peach (Prunus persica)[J]. Genetics and Molecular Research,2012,11(4):4789-4809.
[25]Wang X B,Ding Y F,Wang Y,et al. Genes involved in ethylene signal transduction in peach (Prunus persica) and their expression profiles during fruit maturation[J]. Scientia Horticulturae,2017,224:306-316.
[26]Cao K,Zhou Z K,Wang Q,et al. Genome-wide association study of 12 agronomic traits in peach[J]. Nature Communications,2016,7:13246.
[27]Bianchi V J,Rubio M,Trainotti L,et al. Prunus transcription factors:breeding perspectives[J]. Frontiers in Plant Science,2015,6:443.

相似文献/References:

[1]连晓东,谭彬,郑先波,等.适于SSR分析的不同生长型桃幼叶基因组DNA提取方法[J].江苏农业科学,2013,41(05):30.
 Lian Xiaodong,et al.Study on extraction method of DNA from young leaves of different growth types peach based on SSR analysis[J].Jiangsu Agricultural Sciences,2013,41(22):30.
[2]郭磊,张斌斌,马瑞娟,等.5-氨基乙酰丙酸处理对桃果实品质及营养生长的影响[J].江苏农业科学,2015,43(12):194.
 Guo Lei,et al.Effects of 5-aminolevulinic acid (ALA) on fruit quality and vegetative growth of peach[J].Jiangsu Agricultural Sciences,2015,43(22):194.
[3]王成霞,孙虎.不同基因型桃叶片光合指标与树体矮化的相关性[J].江苏农业科学,2013,41(08):160.
 Wang Chengxia,et al.Correlation between leaves photosynthetic indices and dwarf of different peach trees[J].Jiangsu Agricultural Sciences,2013,41(22):160.
[4]张佳俊,贾浩,陈海江,等.桃新品系保佳俊的贮藏特性[J].江苏农业科学,2014,42(08):259.
 Zhang Jiajun,et al.Storage characteristics of a new peach variety “Baojiajun”[J].Jiangsu Agricultural Sciences,2014,42(22):259.
[5]王炳华,陈丽楠,刘秀春.优化配方施肥对桃、李、杏产量和品质的影响[J].江苏农业科学,2014,42(08):152.
 Wang Binghua,et al.Effects of optimized formula fertilization on yield and quality of peach, plum,and apricot[J].Jiangsu Agricultural Sciences,2014,42(22):152.
[6]毛妮妮,刘照亭,阎永齐,等.不同材料和规格的容器对水蜜桃容器苗生长的影响[J].江苏农业科学,2013,41(11):185.
 Mao Nini,et al.Effects of containers with different materials and sizes on growth of juicy peach seedlings cultivated in container[J].Jiangsu Agricultural Sciences,2013,41(22):185.
[7]孙素芬,冷翔鹏,周顺标,等.桃无公害生产病虫害综合防治技术[J].江苏农业科学,2013,41(12):129.
 Sun Sufen,et al.Integrated management techniques of pests and diseases under pollution-free production of peaches[J].Jiangsu Agricultural Sciences,2013,41(22):129.
[8]霍如雪,刘振宁,杨青,等.桃PME基因家族的鉴定与分析[J].江苏农业科学,2016,44(05):24.
 Huo Ruxue,et al.Identification and analysis of PME gene family in peach[J].Jiangsu Agricultural Sciences,2016,44(22):24.
[9]赵剑波,郭继英,姜全,等.桃抗重茬砧木GF677组培快繁技术[J].江苏农业科学,2016,44(05):60.
 Zhao Jianbo,et al.Tissue culture and rapid propagation technology of peach root stock GF677 with resistance to continuous cropping[J].Jiangsu Agricultural Sciences,2016,44(22):60.
[10]霍如雪,刘振宁,杨青,等.桃PG基因家族的鉴定与分析[J].江苏农业科学,2016,44(06):33.
 Huo Ruxue,et al.Identification and analysis of PG gene family in peach[J].Jiangsu Agricultural Sciences,2016,44(22):33.

备注/Memo

备注/Memo:
收稿日期:2021-12-30
基金项目:河北省高层次人才资助项目(编号:A201901058);河北省重点研发计划(编号:16226313D)。
作者简介:王海静(1982—),女,河北乐亭人,硕士,实验师,主要从事桃种质资源与分子生物学研究工作。E-mail:chinahjwang@126.com。
通信作者:武军凯,博士,副教授,主要从事果树遗传育种、果树种质资源与分子生物学研究。E-mail:mans5@163.com。
更新日期/Last Update: 2022-11-20