卷曲螺旋结构及其研究进展-《江苏农业科学》

参考文献/References:

［1］Crick F C. The packing of α-helices：simple coiled coils［J］. Acta Crystallographica，1953，6：689-697.
［2］Woolfson D N. The design of coiled-coil structures and assemblies［J］. Advances in Protein Chemistry，2005，70：79-112.
［3］Lupas A. Coiled coils：new structures and new functions［J］. Trends in Biochemical Sciences，1996，21(10)：375-382.
［4］Wolf E，Kim P S，Berger B. Multi coil：a program for predicting two-and three-stranded coiled coils［J］. Protein Science，1997，6(6)：1179-1189.
［5］Burkhard P，Stetefeld J，Strelkov S V. Coiled coils：a highly versatile protein folding motif［J］. Trends in Cell Biology，2001，11(2)：82-88.
［6］Delahay R M，Frankel G. Coiled-coil proteins associated with type Ⅲ secretion systems：a versatile domain revisited［J］. Molecular Microbiology，2002，45(4)：905-916.
［7］Zhou N E，Kay C M，Hodges R S. The role of interhelical ionic interactions in controlling protein folding and stability. De novo designed synthetic two-stranded alpha-helical coiled-coils［J］. Journal of Molecular Biology，1994，237(4)：500-512.
［8］Yu Y B. Coiled-coils：stability，specificity，and drug delivery potential［J］. Advanced Drug Delivery Reviews，2002，54(8)：1113-1129.
［9］Oakley M G，Kim P S. A buried polar interaction can direct the relative orientation of helices in a coiled coil［J］. Biochemistry，1998，37(36)：12603-12610.
［10］Tang Y，Ghirlanda G，Vaidehi N，et al. Stabilization of coiled-coil peptide domains by introduction of trifluoroleucine［J］. Biochemistry，2001，40(9)：2790-2796.
［11］Zeng X，Herndon A M，Hu J C. Buried asparagines determine the dimerization specificities of leucine zipper mutants［J］. Proceedings of the National Academy of Sciences of the United States of America，1997，94(8)：3673-3678.
［12］Krylov D，Barchi J，Vinson C. Inter-helical interactions in the leucine zipper coiled coil dimer：pH and salt dependence of coupling energy between charged amino acids［J］. Journal of Molecular Biology，1998，279(4)：959-972.
［13］Lear J D，Gratkowski H，Adamian L，et al. Position-dependence of stabilizing polar interactions of asparagine in transmembrane helical bundles［J］. Biochemistry，2003，42(21)：6400-6407.
［14］Zeng X，Zhu H，Lashuel H A，et al. Oligomerization properties of GCN4 leucine zipper e and g position mutants［J］. Protein Science，1997，6(10)：2218-2226.
［15］Lavigne P，Kondejewski L H，Houston M E，et al. Preferential heterodimeric parallel coiled-coil formation by synthetic Max and c-Myc leucine zippers：a description of putative electrostatic interactions responsible for the specificity of heterodimerization［J］. Journal of Molecular Biology，1995，254(3)：505-520.
［16］Yu Y B，Wagschal K C，Mant C T，et al. Trapping the monomeric alpha-helical state during unfolding of coiled-coils by reversed-phase liquid chromatography［J］. Journal of Chromatography a，2000，890(1)：81-94.
［17］Yu Y，Monera O D，Hodges R S，et al. Ion pairs significantly stabilize coiled-coils in the absence of electrolyte［J］. Journal of Molecular Biology，1996，255(3)：367-372.
［18］Schnarr N A，Kennan A J. pH-triggered strand exchange in coiled-coil heterotrimers［J］. Journal of the American Chemical Society，2003，125(21)：6364-6365.
［19］Meng F G，Zeng X，Hong Y K，et al. Dissociation and unfolding of GCN4 leucine zipper in the presence of sodium dodecyl sulfate［J］. Biochimie，2001，83(10)：953-956.
［20］Ramos J，Lazaridis T. Computational analysis of residue contributions to coiled-coil topology［J］. Protein Science，2011，20(11)：1845-1855.
［21］张莹，徐晓燕，李娟，等. α-螺旋跨膜蛋白拓扑结构预测方法的评价［J］. 生物信息学，2012，10(4)：259-263.
［22］左利民，康艳晶，罗施中. α-螺旋跨膜蛋白的折叠和自组装［J］. 科学通报，2010，55(15)：1426-1437.
［23］何愈，邹德里. 蛋白质螺旋状螺旋折叠区段的介绍［J］. Chemistry：the Chinese chem soc，Taibei，2005，63(2)：269-280.
［24］Harbury P B，Zhang T，Kim P S，et al. A switch between two-，three-，and four-stranded coiled coils in GCN4 leucine zipper mutants［J］. Science，1993，262(5138)：1401-1407.
［25］Gazi A D，Charova S N，Panopoulos N J，et al. Coiled-coils in type Ⅲ secretion systems：structural flexibility，disorder and biological implications［J］. Cellular Microbiology，2009，11(5)：719-729.
［26］Pallen M J，Dougan G，Frankel G. Coiled-coil domains in proteins secreted by type Ⅲ secretion systems［J］. Molecular Microbiology，1997，25(2)：423-425.
［27］Guttman D S，Vinatzer B A，Sarkar S F，et al. A functional screen for the type Ⅲ(Hrp)secretome of the plant pathogen Pseudomonas syringae［J］. Science，2002，295(5560)：1722-1726.
［28］Ji Z，Song C，Lu X，et al. Two coiled-coil regions of Xanthomonas oryzae pv. oryzae harpin differ in oligomerization and hypersensitive response induction［J］. Amino Acids，2011，40(2)：381-392.
［29］Sohn K H，Hughes R K，Piquerez S J，et al. Distinct regions of the Pseudomonas syringae coiled-coil effector AvrRps4 are required for activation of immunity［J］. Proceedings of the National Academy of Sciences of the United States of America，2012，109(40)：16371-16376.
［30］Lee S K，Song M Y，Seo Y S，et al. Rice Pi5-mediated resistance to Magnaporthe oryzae requires the presence of two coiled-coil-nucleotide-binding-leucine-rich repeat genes［J］. Genetics，2009，181(4)：1627-1638.
［31］Qi D，DeYoung B J，Innes R W. Structure-function analysis of the coiled-coil and leucine-rich repeat domains of the RPS5 disease resistance protein［J］. Plant Physiology，2012，158(4)：1819-1832.
［32］Rairdan G J，Collier S M，Sacco M A，et al. The coiled-coil and nucleotide binding domains of the potato Rx disease resistance protein function in pathogen recognition and signaling［J］. The Plant Cell，2008，20(3)：739-751.
［33］Maekawa T，Cheng W，Spiridon L N，et al. Coiled-coil domain-dependent homodimerization of intracellular barley immune receptors defines a minimal functional module for triggering cell death［J］. Cell Host & Microbe，2011，9(3)：187-199.
［34］Liu X Q，Zhang D，Zhang X M，et al. Study on the interaction between methyl jasmonate and the coiled-coil domain of rice blast resistance protein Pi36 by spectroscopic methods［J］. Spectrochimica Acta，2012，88：72-76.
［35］王维，丁璟珒，王大成.绿脓杆菌特有的Tsi2三维结构-一种全新卷曲螺旋构象的类抗毒素蛋白［J］. 生物化学与生物物理进展，2012，39(7)：640-646.
［36］Jiang H，Wang F F，Wu Y T，et al. MULTIPOLAR SPINDLE 1(MPS1)，a novel coiled-coil protein of Arabidopsis thaliana，is required for meiotic spindle organization［J］. The Plant Journal，2009，59(6)：1001-1010.
［37］Venkatakrishnan S，Mackey D，Meier I. Functional investigation of the plant-specific long coiled-coil proteins PAMP-INDUCED COILED-COIL(PICC)and PICC-LIKE(PICL)in Arabidopsis thaliana［J］. PLoS One，2013，8(2)：e57283.
［38］刘天德，袁荣发，邵江华.Rho相关卷曲螺旋蛋白激酶与细胞凋亡［J］. 广东医学，2013，34(2)：307-309.
［39］Szappanos B，Süveges D，Nyitray L，et al. Folded-unfolded cross-predictions and protein evolution：the case study of coiled-coils［J］. FEBS Letters，2010，584(8)：1623-1627.
［40］Mahrenholz C C，Abfalter I G，Bodenhofer U，et al. Complex networks govern coiled-coil oligomerization—predicting and profiling by means of a machine learning approach［J］. Molecular & Cellular Proteomics，2011，10(5)：M110.004994.
［41］Armstrong C T，Vincent T L，Green P J，et al. SCORER 2.0：an algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences［J］. Bioinformatics，2011，27(14)：1908-1914.
［42］Trigg J，Gutwin K，Keating A E，et al. Multicoil2：predicting coiled coils and their oligomerization states from sequence in the twilight zone［J］. PloS One，2011，6(8)：e23519.
［43］Vincent T L，Green P J，Woolfson D N. LOGICOIL—multi-state prediction of coiled-coil oligomeric state［J］. Bioinformatics，2013，29(1)：69-76.
［44］Fletcher J M，Boyle A L，Bruning M，et al. A basis set of de novo coiled-coil peptide oligomers for rational protein design and synthetic biology［J］. ACS Synthetic Biology，2012，1(6)：240-250.
［45］Ogihara N L，Weiss M S，Degrado W F，et al. The crystal structure of the designed trimeric coiled coil coil-VaLd：implications for engineering crystals and supramolecular assemblies［J］. Protein Science，1997，6(1)：80-88.
［46］魏香，曾宪纲，周海梦.蛋白质结构中卷曲螺旋的研究进展［J］. 中国生物化学与分子生物学报，2004，20(5)：565-571.
［47］Fernandez-Rodriguez J，Marlovits T C. Induced heterodimerization and purification of two target proteins by a synthetic coiled-coil tag［J］. Protein Science，2012，21(4)：511-519.
［48］Boucher C，St-Laurent G，Jolicoeur M，et al. Protein detection by Western blot via coiled-coil interactions［J］. Analytical Biochemistry，2010，399(1)：138-140.
［49］Liberelle B，Bartholin L，Boucher C，et al. New ELISA approach based on coiled-coil interactions［J］. Journal of Immunological Methods，2010，362(1-2)：161-167.
［50］Murase S，Ishino S，Ishino Y，et al. Control of enzyme reaction by a designed metal-ion-dependent α-helical coiled-coil protein［J］. Journal of Biological Inorganic Chemistry，2012，17(5)：791-799.
［51］Versluis F，Voskuhl J，van Kolck B，et al. In situ modification of plain liposomes with lipidated coiled coil forming peptides induces membrane fusion［J］. Journal of the American Chemical Society，2013，135(21)：8057-8062.
［52］Zheng T，Voskuhl J，Versluis F，et al. Controlling the rate of coiled coil driven membrane fusion［J］. Chemical Communications，2013，49(35)：3649-3651.
［53］Chao H，Bautista DL，Litowski J，et al. Use of a heterodimeric coiled-coil system for biosensor application and affinity purification［J］. Journal of Chromatography B，1998，715(1)：307-329.
［54］de Crescenzo G，Pham P L，Durocher Y，et al. Transforming growth factor-beta(TGF-beta)binding to the extracellular domain of the type Ⅱ TGF-beta receptor：receptor capture on a biosensor surface using a new coiled-coil capture system demonstrates that avidity contributes significantly to high affinity binding［J］. Journal of Molecular Biology，2003，328：1173-1183.
［55］Pechar M，Pola R，Laga R，et al. Coiled coil peptides as universal linkers for the attachment of recombinant proteins to polymer therapeutics［J］. Biomacromolecules，2011，12(10)：3645-3655.
［56］Pola R，Laga R，Ulbrich K，et al. Polymer therapeutics with a coiled coil motif targeted against murine bcl1 leukemia［J］. Biomacromolecules，2013，14(3)：881-889.
［57］Larzábal M，Zotta E，Ibarra C，et al. Effect of coiled-coil peptides on the function of the type III secretion system-dependent activity of enterohemorragic Escherichia coli O157：H7 and Citrobacter rodentium［J］. International Journal of Medical Microbiology，2013，303(1)：9-15.
［58］Kilgore NR，Salzwedel K，Reddick M，et al. Direct evidence that C-peptide inhibitors of human immunodeficiency virus type 1 entry bind to the gp41 N-helical domain in receptor-activated viral envelope［J］. Journal of Virology，2003，77(13)：7669-7672.
［59］Zeng X G，Zhou H M. Designing stable antiparallel coiled coil dimers［J］. Tsinghua Science and Technology，2001，6：253-256.
［60］McFarlane A A，Orriss G L，Stetefeld J. The use of coiled-coil proteins in drug delivery systems［J］. European Journal of Pharmacology，2009，625(1/2/3)：101-107.

相似文献/References:

[1]于一帆,朱小彬,葛会敏,等.基于绿色荧光蛋白瞬时表达的植物亚细胞定位方法[J].江苏农业科学,2014,42(12):58.
　Yu Yifan,et al.Plant subcellular localization methods based on transient expression of green fluorescent protein[J].Jiangsu Agricultural Sciences,2014,42(02):58.
[2]李栎,纪春艳,王振中.水稻叶片质膜蛋白的提取与纯化[J].江苏农业科学,2013,41(06):44.
　Li Li,et al.Separation and purification of plasma membrane proteins from rice leaves[J].Jiangsu Agricultural Sciences,2013,41(02):44.
[3]朱淑云,南阳,王冲,等.酶预处理对水飞蓟蛋白质提取效果的影响[J].江苏农业科学,2013,41(07):273.
　Zhu Shuyun,et al.Effect of enzymatic pretreatment on protein extraction from Silybum marianum[J].Jiangsu Agricultural Sciences,2013,41(02):273.
[4]祝海娟,赵晨霞,张翌楠,等.盐法提取大麦虫蛋白质的研究[J].江苏农业科学,2013,41(08):274.
　Zhu Haijuan,et al.Study on protein extraction from Zophobas morio by using salt[J].Jiangsu Agricultural Sciences,2013,41(02):274.
[5]祝海娟,赵晨霞,张翌楠,等.酶法提取大麦虫蛋白质的研究[J].江苏农业科学,2013,41(09):226.
　Zhu Haijuan,et al.Extraction of protein from Zophobas morio with enzyme-assisted method[J].Jiangsu Agricultural Sciences,2013,41(02):226.
[6]江珊,刘焰,赵斌,等.猪苓中多酚、黄酮、多糖和蛋白质提取工艺的优化[J].江苏农业科学,2013,41(09):243.
　Jiang Shan,et al.Optimization of extraction process for polyphenol，flavonoids，polysaccharide and protein from Polyporus umbellatus[J].Jiangsu Agricultural Sciences,2013,41(02):243.
[7]冉文波,赵晨霞.食用昆虫蛋白的研究与开发利用进展[J].江苏农业科学,2013,41(11):13.
　Ran Wenbo,et al.Research progress on development and utilization of protein in edible insects[J].Jiangsu Agricultural Sciences,2013,41(02):13.
[8]杨晓玲,郭金耀.硼钼组合对盐藻生长与物质积累的作用[J].江苏农业科学,2013,41(11):265.
　Yang Xiaoling,et al.Effects of combinations of boron and molybdenum on growth and material accumulation of Dunaliella salina[J].Jiangsu Agricultural Sciences,2013,41(02):265.
[9]徐致远,刘振民,王豪.无添加剂发酵乳的研制[J].江苏农业科学,2013,41(11):283.
　Xu Zhiyuan,et al.Development of fermented milk without additives[J].Jiangsu Agricultural Sciences,2013,41(02):283.
[10]李娟,刘丹梅,孙书伟,等.1株高蛋白海洋酵母菌的鉴定及营养成分分析[J].江苏农业科学,2014,42(01):269.
　Li Juan,et al.Identification and nutrients analysis of a marine yeast strain with high protein[J].Jiangsu Agricultural Sciences,2014,42(02):269.

[1]纪兆林,石刘飞,李健,等.卷曲螺旋结构及其研究进展[J].江苏农业科学,2014,42(02):6-11.
　Ji Zhaolin,et al.Research progress of coiled-coil domain[J].Jiangsu Agricultural Sciences,2014,42(02):6-11.
点击复制

卷曲螺旋结构及其研究进展(PDF)

分享到：

《江苏农业科学》[ISSN:1002-1302/CN:32-1214/S]

文章信息/Info

参考文献/References:

相似文献/References:

备注/Memo

常用功能

导航/Navigate

工具/Tools

统计/Statistics